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Additional file 3: Table S3. of Critical evaluation of the Illumina MethylationEPIC BeadChip microarray for whole-genome DNA methylation profiling

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Genomic regions complementary to cross-reactive probes on the EPIC array with 47 base pair homology. Individual BLAT hits corresponding to the cross-reactive regions in Additional file 1: Table S1. Zero-based coordinates are used. Hits homologous with the reverse complement have been oriented in the forward direction, to be consistent with the annotation in the Illumina manifest file. Reads map to either forward methylated (FM), forward unmethylated (FU), reverse methylated (RM), reverse unmethylated (RU), forward methylated and unmethylated (FMU), or reverse methylated and unmethylated (RMU) in silico versions of the genome. (CSV 46885 kb)

本数据集包含与EPIC芯片(EPIC array)上具备47碱基对同源性的交叉反应探针互补的基因组区域。对应各交叉反应区域的BLAT匹配结果详见附加文件1表S1。本数据集采用零基坐标体系。为与Illumina芯片注释文件的标注规范保持一致,所有对应反向互补序列的匹配结果均已调整至正向链方向。测序读段可比对至虚拟基因组的以下类别:正向甲基化链(forward methylated,FM)、正向非甲基化链(forward unmethylated,FU)、反向甲基化链(reverse methylated,RM)、反向非甲基化链(reverse unmethylated,RU)、正向甲基化与非甲基化共存链(forward methylated and unmethylated,FMU),以及反向甲基化与非甲基化共存链(reverse methylated and unmethylated,RMU)。本数据集为CSV格式,文件大小46885千字节。
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Figshare
创建时间:
2017-12-19
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