Source data and code for Fig. 1a and Fig. 2

This repository contains R code and data for our manuscript:"<b>Hidden zoonotic risk: immunogenetic-pathogen networks shrink in a generalist rodent inhabiting disturbed landscapes</b>"by Ramona Fleischer, Georg Joachim Eibner, Nina Isabell Schwensow, Sofia Paraskevopoulou, Gerd Mayer, Victor Max Corman, Christian Drosten, Kerstin Wilhelm, Alexander Christoph Heni, Simone Sommer and Dominik Werner SchmidIn this work we examined the effect of anthropogenic disturbance at the landscape level on neutral genetic diversity and diversity at the important immune gene region of the Major Histocompatibility Complex class II and multiple pathogen infections in a common neotropical rodent generalist, the Tomey's spiny rat (<i>Proechimys semispinosus</i>).This file contains one of the layers that are necessary to produce figure 2 of the main manuscript using the circos software.

本代码仓库包含支撑我们研究论文的R代码与数据集，论文题为《隐藏的人畜共患病风险：受干扰景观中广食性啮齿动物的免疫遗传-病原体网络发生收缩》，作者为Ramona Fleischer、Georg Joachim Eibner、Nina Isabell Schwensow、Sofia Paraskevopoulou、Gerd Mayer、Victor Max Corman、Christian Drosten、Kerstin Wilhelm、Alexander Christoph Heni、Simone Sommer 与 Dominik Werner Schmid。本研究以新热带区常见的广食性啮齿动物——托梅棘鼠（*Proechimys semispinosus*）为研究对象，探讨了景观尺度的人为干扰对其中性遗传多样性、重要免疫基因区域主要组织相容性复合体II类（Major Histocompatibility Complex class II）的多样性，以及多重病原体感染的影响。本文件包含了使用circos软件绘制主论文图2所需的图层数据之一。