Normalized protein abundance data and protein annotations for proteomic data from laboratory cultures of Ruegeria pomeroyi DSS-3 and Alteromonas macleodii MIT1002 in 2022

This dataset includes normalized protein abundance data and protein annotations for proteomic data from cultures of Ruegeria pomeroyi DSS-3 and Alteromonas macleodii MIT1002. These model marine bacteria were grown in defined culture media with either glucose, acetate, or a mix of both as carbon substrates. The data are sampled so as to capture the metabolic differences the bacteria employ when catabolizing these different substrates and when switching between them. The raw proteomics files are available on the Proteomics IDEntification Database (PRIDE) under accession PXD045824. The proteomic data accompanies the transcriptomic expression data available at BCO-DMO dataset 916134 (https://www.bco-dmo.org/dataset/916134).

本数据集包含鲁杰氏菌属菌株DSS-3（Ruegeria pomeroyi DSS-3）与麦克洛迪交替单胞菌属菌株MIT1002（Alteromonas macleodii MIT1002）的培养物蛋白质组学数据的标准化蛋白丰度数据及蛋白注释信息。该两株模式海洋细菌分别在以葡萄糖、乙酸盐或二者混合作为碳源的合成培养基中培养。本数据集的采样设计旨在捕捉细菌在代谢分解不同碳底物以及在底物间切换时所采用的代谢差异。原始蛋白质组学文件可于蛋白质组学鉴定数据库（Proteomics IDEntification Database，PRIDE）中获取，登录号为PXD045824。本蛋白质组学数据配套的转录组表达数据可在BCO-DMO数据集916134（https://www.bco-dmo.org/dataset/916134）中获取。