SHAPE II WGS raw data

Pangenomes are collections of annotated genome sequences of multiple individuals of a species. The structural variants uncovered by these datasets are a major asset to genetic analysis in crop plants. Here, we report a pangenome of barley comprising long-read sequence assemblies of 76 wild and domesticated genomes and short-read sequence data of 1,315 genotypes. A total of 1,000 plant genetic resources and 315 elite barley varieties were used for whole genome resequencing. Illumina Nextera libraries were prepared and sequenced on an Illumina NovaSeq 6000 at IPK Gatersleben.

泛基因组（Pangenome）是同一物种多个个体的注释基因组序列集合。此类数据集所揭示的结构变异，是作物遗传分析的重要资源。本研究报道了一个大麦泛基因组，该数据集包含76份野生与栽培大麦基因组的长读长序列组装结果，以及1315份基因型的短读长序列数据。共计使用1000份植物遗传资源与315份优良大麦品种进行全基因组重测序。实验采用Illumina Nextera文库制备方案，并在IPK盖特斯莱本（IPK Gatersleben）的Illumina NovaSeq 6000测序平台上完成测序。