Additional file 2 of petal: Co-expression network modelling in R

petalâ s output file from its genes of interest analysis. Genes of interests are listed with their corresponding cluster coefficient and degree, the number of maximal cliques within the gene of interest subnetwork is stated and each maximal cliqueâ s members are provided with the associated vicinity networkâ s name, lastly a summary table of the vicinity networks is given. The summary table includes the name of the vicinity network (e.g. VN1, VN2), the number of nodes within the particular vicinity network (VNsize), the number of genes of interest within the vicinity network (GoInum), and its density. (TXT 196 kb)

本文件为petal的目标基因（Genes of Interest）分析输出文件。文件中列出了所有目标基因及其对应的聚类系数（cluster coefficient）与节点度（degree），同时标注了目标基因子网（subnetwork）内的极大团（maximal cliques）数量，并为每个极大团的成员提供了其所属邻域网络（Vicinity Network, VN）的名称；最后还提供了邻域网络汇总表。该汇总表包含以下字段：邻域网络名称（示例：VN1、VN2）、特定邻域网络的节点总数（VNsize）、该邻域网络内的目标基因数量（GoInum）以及网络密度（density）。（TXT格式，大小196 KB）