Comparison of coastal phytoplankton composition estimated from the V4 and V9 regions of 18S rRNA gene with a focus on Chlorophyta
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https://figshare.com/articles/dataset/Comparison_of_coastal_phytoplankton_composition_estimated_from_the_V4_and_V9_regions_of_18S_rRNA_gene_with_a_focus_on_Chlorophyta/4252646
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资源简介:
Supplementary data 1. Mothur script for sequence analysis
Supp. data 2. Fasta file of Chlorophyta OTUs for V4
Supp. data 3. Fasta file of Chlorophyta OTUs for V9
Supp. data 4. Chlorophyta OTUs for V4 with assignation and read abundance at the different stations (Excel file).
Supp. data 5. Chlorophyta OTUs for V9 with assignation and read abundance at the different stations (Excel file).
Supp. data 6. Top 10 BLAST hits against Genbank nr database for Chlorophyta V4 OTUs. Red lines correspond to OTUs badly assigned to non Chlorophyta and green corresponds to OTUs badly assigned to another Chlorophyta representative.
Supp. data 7. Top 10 BLAST hits against Genbank nr database for Chlorophyta V9 OTUs. Red lines correspond to OTUs badly assigned to non Chlorophyta and green lines corresponds to OTUs badly assigned to another Chlorophyta representative.
补充数据1. 用于序列分析的Mothur脚本
补充数据2. 用于V4区的绿藻门(Chlorophyta)操作分类单元(Operational Taxonomic Units, OTUs)的FASTA格式文件
补充数据3. 用于V9区的绿藻门操作分类单元(OTUs)的FASTA格式文件
补充数据4. 不同站位带有分类注释及测序读段丰度的V4区绿藻门操作分类单元(OTUs)数据(Excel文件)
补充数据5. 不同站位带有分类注释及测序读段丰度的V9区绿藻门操作分类单元(OTUs)数据(Excel文件)
补充数据6. 针对V4区绿藻门操作分类单元(OTUs)与GenBank非冗余(nr)数据库比对得到的前10条BLAST最佳匹配结果。其中红色线条代表被错误注释为非绿藻门的操作分类单元,绿色线条代表被错误注释为其他绿藻门代表序列的操作分类单元
补充数据7. 针对V9区绿藻门操作分类单元(OTUs)与GenBank非冗余(nr)数据库比对得到的前10条BLAST最佳匹配结果。其中红色线条代表被错误注释为非绿藻门的操作分类单元,绿色线条代表被错误注释为其他绿藻门代表序列的操作分类单元
创建时间:
2017-09-01



