Data from: Estimating the number of sexual events per generation in a facultatively sexual haploid population
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The following files are included in this dataset:C script used in simulations: File contains the C scripts for three models used to simulated the behaviour of Fst between mating type subpopulations and LD between marker and mating type loci in haploid populations where there is 1. No selection, 2. Constant selection and 3. Stochastic selection on marker loci.Oregon early 1990 Zymoseptoria tritici RFLP data: File contains joint mating type and RFLP genotypes for Zymoseptoria tritici samples collected in Oregon early in 1990Oregon late 1990 Zymoseptoria tritici RFLP data: Contains joint mating type and RFLP genotypes of Zymoseptoria tritici isolates collected late in 1990 in Oregon.VA 2009 Erisiphe necator microsatellite data: Contains joint mating type and microsatellite genotypes of Erisiphe necator isolates collected late in 2009 in Virginia.VA 2010 Erisiphe necator microsatellite data: Contains joint mating type and microsatellite genotypes of Erisiphe necator isolates collected early in 2010 in Virginia.Australia Rhyncosporium secalis microsatellite data: Contains joint mating type and microsatelite genotypes of Rhyncosporium secalis isolates collected in Australia.Norway Rhyncosporium secalis microsatellite data: Contains joint mating type and microsatelite genotypes of Rhyncosporium secalis isolates collected in Norway.Dothistroma septosporum microsatellite data: Dothistroma septosporum microsatellite data
本数据集包含以下文件:
1. 模拟用C脚本:该文件包含适配三种模型的C脚本,用于模拟单倍体种群中交配型亚种群间的固定指数(Fixation Index, Fst)以及标记位点与交配型位点间的连锁不平衡(Linkage Disequilibrium, LD),三种模型分别对应三类场景:1. 无选择;2. 恒定选择;3. 标记位点存在随机选择。
2. 1990年初俄勒冈州小麦黄斑病菌(Zymoseptoria tritici)限制性片段长度多态性(Restriction Fragment Length Polymorphism, RFLP)数据集:该文件包含1990年初于俄勒冈州采集的小麦黄斑病菌样本的交配型与RFLP联合基因型数据。
3. 1990年末俄勒冈州小麦黄斑病菌(Zymoseptoria tritici)RFLP数据集:包含1990年末于俄勒冈州采集的小麦黄斑病菌分离株的交配型与RFLP联合基因型数据。
4. 2009年弗吉尼亚州葡萄白粉菌(Erisiphe necator)微卫星(microsatellite)数据集:包含2009年末于弗吉尼亚州采集的葡萄白粉菌分离株的交配型与微卫星联合基因型数据。
5. 2010年弗吉尼亚州葡萄白粉菌(Erisiphe necator)微卫星数据集:包含2010年初于弗吉尼亚州采集的葡萄白粉菌分离株的交配型与微卫星联合基因型数据。
6. 澳大利亚大麦条纹病菌(Rhyncosporium secalis)微卫星数据集:包含于澳大利亚采集的大麦条纹病菌分离株的交配型与微卫星联合基因型数据。
7. 挪威大麦条纹病菌(Rhyncosporium secalis)微卫星数据集:包含于挪威采集的大麦条纹病菌分离株的交配型与微卫星联合基因型数据。
8. 松针褐斑病菌(Dothistroma septosporum)微卫星数据:该文件包含松针褐斑病菌的微卫星数据。
创建时间:
2018-11-27



