Additional file 2 of An evolutionary driver of interspersed segmental duplications in primates

Additional file 2: Table S1. List of large-insert clones from OWM, NWM and prosimian lineages. Table S2. List of LCR16a positive clones from apes. Table S3. Sequence contigs generated using large-insert BAC clones. Table S4. Characteristics of LCR16a-associated duplications. Table S5. dN/dS ratio analysis (synonymous/nonsynonymous) for individual NPIP exons. Table S6. Primer sequences for BAC hybridization probes. Table S7. Primer sequences for RT-PCR expression experiments. Table S8. Oligonucleotide capture probes used for Iso-Seq analysis.

附加文件2：表S1。旧世界猴（Old World Monkey, OWM）、新世界猴（New World Monkey, NWM）与原猴亚目类群的大片段插入克隆列表。表S2。类人猿LCR16a阳性克隆列表。表S3。利用大片段插入细菌人工染色体（Bacterial Artificial Chromosome, BAC）克隆生成的序列重叠群。表S4。LCR16a相关复制事件的特征。表S5。针对单个NPIP外显子的dN/dS比率（同义/非同义）分析。表S6。细菌人工染色体（BAC）杂交探针引物序列。表S7。逆转录聚合酶链式反应（Reverse Transcription Polymerase Chain Reaction, RT-PCR）表达实验引物序列。表S8。用于Iso-Seq分析的寡核苷酸捕获探针。