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Additional file 3 of Integrative profiling of Epstein–Barr virus transcriptome using a multiplatform approach

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https://figshare.com/articles/dataset/Additional_file_3_of_Integrative_profiling_of_Epstein_Barr_virus_transcriptome_using_a_multiplatform_approach/17982436
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Additional file 3. TESs of EBV. TESs were detected using the LoRTIA software. The -50–0 nt region upstream from the TES was analyzed for PASs. Distances from the TES are in nucleotides. The ±50 nts region of the TES was also retrieved for sequence analysis. The TES positions from previous PE-seq experiment was matched with our results. The sample number in which a given TES was detected is shown. TES coordinates are according to the genome of strain Akata (NCBI accession: KC207813.1).

附加文件3:爱泼斯坦-巴尔病毒(Epstein-Barr virus, EBV)的转录终止位点(transcription termination site, TES)数据集。本研究采用LoRTIA软件完成所有TES的检测工作。针对每个TES上游-50~0 nt的区域,开展多聚腺苷酸化信号(polyadenylation signal, PAS)分析,位点距TES的相对距离以核苷酸为计量单位。同时提取TES上下游各50 nt的序列区域用于序列分析。将既往PE-seq实验获得的TES位点与本研究结果进行匹配比对。同时标注了可检测到对应TES的样本编号。所有TES的坐标均参照Akata毒株基因组(NCBI登录号:KC207813.1)进行标注。
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2022-01-06
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