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Additional file 11 of A strategy to detect metabolic changes induced by exposure to chemicals from large sets of condition-specific metabolic models computed with enumeration techniques

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DataCite Commons2024-08-17 更新2024-08-26 收录
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Supplementary Material 11. S6 Table: DEG lists size obtained from the ToxicoDB database. This table summarize key metadata for each compound such as the dose, exposure time, number of replicates, cell type, cell batch, control vehicle, DEG signature size and metabolic DEG signature size. Were considered differentially expressed, genes having a log2(abs(FC)) above 0.26 and a FDR corrected p-value below 0.05.

补充材料11:S6表:源自ToxicoDB数据库的差异表达基因(Differentially Expressed Genes,DEG)列表规模。该表汇总了每种受试化合物的关键元数据,包括给药剂量、暴露时长、生物学重复次数、细胞类型、细胞批次、对照溶剂、DEG特征大小以及代谢相关DEG特征大小。本研究将满足log₂(|折叠变化(Fold Change,FC)|)>0.26,且经错误发现率(False Discovery Rate,FDR)校正后的p值<0.05的基因,判定为差异表达基因。
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figshare
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2024-08-15
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