Raw genome sequencing data of the leafhopper Hishimonus sellatus
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https://www.ncbi.nlm.nih.gov/sra/SRP664489
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资源简介:
Hishimonus sellatus (Hemiptera: Cicadellidae) is a significant agricultural pest and a known vector of plant phytoplasmas, including the mulberry dwarf phytoplasma. To obtain a high-quality reference genome, we employed a hybrid sequencing strategy. This project contains raw sequencing data generated from PacBio HiFi technology for primary contig assembly and Hi-C chromatin interaction mapping for chromosome-level scaffolding. Additionally, Illumina short-read sequencing was performed for genome survey and assembly polishing. Transcriptome sequencing (RNA-Seq) was also conducted to facilitate accurate gene prediction and genome annotation. This genomic resource will support future research on the biology, evolution, and pest management of H. sellatus.
凹缘菱纹叶蝉(Hishimonus sellatus,半翅目(Hemiptera):叶蝉科(Cicadellidae))是一类重要农业害虫,同时也是包括桑矮缩植原体在内的多种植物植原体的已知传播媒介。为获取高质量参考基因组,本研究采用混合测序策略。本项目包含用于原始重叠群组装的PacBio HiFi测序原始数据,以及用于染色体水平支架构建的Hi-C染色质相互作用图谱数据。此外,本研究还开展了Illumina短读长测序,用于基因组调查与组装抛光。同时,本研究进行了转录组测序(RNA-Seq),以辅助实现精准的基因预测与基因组注释。本基因组资源将为后续针对凹缘菱纹叶蝉(H. sellatus)的生物学特性、演化历程及害虫防控相关研究提供有力支撑。
创建时间:
2026-01-21



