Properties of the Chromatin Fiber Sampled from Molecular Biosystems Simulations

This data set contains properties of the chromatin fiber sampled from molecular biosystems simulations and is created to support a manuscript "Submolecular-resolution 3D Simulations of the Oct4 Promoter Region Predict Structural Mechanism of Heterochromatin Formation". The included properties are radius of gyration (Rg_Mean), number of HP1-mediated inter-nucleosome bridges (nBridges_Mean), average size of HP1-mediated loops (mBRIDGE_loop_Mean). Each value is a mean over 100 simulation snapshots.

本数据集包含从分子生物系统模拟中采样得到的染色质纤维相关属性，其构建目的是为论文《Oct4启动子区域的亚分子分辨率三维模拟预测异染色质形成的结构机制》（Submolecular-resolution 3D Simulations of the Oct4 Promoter Region Predict Structural Mechanism of Heterochromatin Formation）提供支撑。所涵盖的属性包括回转半径（radius of gyration, Rg_Mean）、HP1介导的核小体间桥接数量（number of HP1-mediated inter-nucleosome bridges, nBridges_Mean）以及HP1介导的环平均尺寸（average size of HP1-mediated loops, mBRIDGE_loop_Mean）。所有数值均为100个模拟快照的平均值。