L.vannamei DEGs under acid stress

Litopenaeus vannamei Transcriptome under acid and alkline stresses. To understand the molecular mechanism of crustacean responses to low pH, we used RNA sequencing (RNA-seq) and investigated expression changes in whole gill transcriptomes of L. vannamei. We compared gill transcriptome of adult L. vannamei challenged by low pH (pH= 6.8) and a nonchallenged control group (pH= 8.0) at 1 h and 48 h, by using the Illumina HiSeq 4000 platform. This is the first study addressing the molecular response of the gills of L. vannamei to low pH stress at the whole-transcriptome level. The raw reads data can be obtained from the Short Read Archive of the National Center for Biotechnology Information under accession number SRP116151 or bioproject number PRJNA400112. The raw FASTQ file is too large for Mendeley storage limit, please refer to NCBI SRA.

酸碱胁迫下的凡纳滨对虾（Litopenaeus vannamei）转录组。为解析甲壳动物响应低pH环境的分子机制，本研究采用RNA测序（RNA-seq）技术，对凡纳滨对虾的全鳃转录组表达变化开展了分析。本研究借助Illumina HiSeq 4000测序平台，对比了暴露于低pH（pH=6.8）环境1小时与48小时的成年凡纳滨对虾鳃转录组，与未受胁迫的对照组（pH=8.0）的表达差异。本研究为首个在全转录组层面探究凡纳滨对虾鳃组织对低pH胁迫分子响应的相关研究。原始测序读段数据可从美国国家生物技术信息中心（National Center for Biotechnology Information, NCBI）的短读段存档库（Short Read Archive, SRA）获取，登录号为SRP116151，生物项目编号为PRJNA400112。原始FASTQ文件体积过大，超出Mendeley的存储上限，相关数据请参照NCBI SRA获取。