Supplementary data for "Austromonticola, a new genus of broad-nosed weevil (Coleoptera, Curculionidae, Entiminae) from montane areas of New Zealand"
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https://figshare.com/articles/dataset/Supplementary_data_for_Austromonticola_a_new_genus_of_broad-nosed_weevil_Coleoptera_Curculionidae_Entiminae_from_montane_areas_of_New_Zealand_/5367457
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资源简介:
This fileset contains DNA alignments, analysis scripts and locality and morphological data associated with the taxonomic revision "Austromonticola, a new genus of broad-nosed weevil (Coleoptera: Curculionidae: Entiminae) from montane areas of New Zealand" (Brown SDJ (2017). ZooKeys. doi: 10.3897/zookeys.xx.xx.12649)
DNA alignment files in FASTA format:
coi.fasta: 3' end of the cytochrome oxidase I mitochondrial gene (799 bp, 8 sequences)
coib.fasta: 5' end ("barcoding region") of the cytochrome oxidase I mitochondrial gene (669 bp, 2 sequences)
28s.fasta: D2-D3 region of 28S ribosomal RNA gene (756 bp, 9 sequences)
argk.fasta: arginine kinase nuclear gene (715 bp, 6 sequences)
cad.fasta: CAD nuclear gene (460 bp, 7 sequences)
Analysis scripts:
AustromonticolaMolecularDiagnostics.R: Script file containing R code for creating the figures in the "Molecular Diagnostics" section of the paper.
Spreadsheet:
AustromonticolaData.csv:
comma separated table containing transcribed label data, georeferenced
localities, and morphological data. Fields follow Darwin Core standards
for geographic and label data. Morphological data fields are somewhat
more idiosyncratic, but were intended to be self-explanatory.
本文件集包含DNA序列比对文件、分析脚本,以及与分类学修订论文《Austromonticola:新西兰山地地区宽喙象新属(鞘翅目:象甲科:Entiminae亚科)》(Brown SDJ, 2017. ZooKeys. DOI: 10.3897/zookeys.xx.xx.12649)相关的分布记录与形态学数据。
FASTA格式(FASTA)的DNA序列比对文件:
coi.fasta:线粒体细胞色素氧化酶I基因的3'端序列(799 bp,8条序列)
coib.fasta:线粒体细胞色素氧化酶I基因的5'端(“条形码区域”)序列(669 bp,2条序列)
28s.fasta:28S核糖体RNA基因的D2-D3区域(756 bp,9条序列)
argk.fasta:精氨酸激酶核基因(715 bp,6条序列)
cad.fasta:CAD核基因(460 bp,7条序列)
分析脚本:
AustromonticolaMolecularDiagnostics.R:包含用于生成论文“分子诊断”章节图表的R代码脚本文件。
电子表格:
AustromonticolaData.csv:逗号分隔的表格文件,包含转录的标本标签数据、带地理坐标的分布记录及形态学数据。其地理与标签数据字段遵循达尔文核心(Darwin Core)标准;形态学数据字段虽略显特殊,但设计初衷为易于理解。
创建时间:
2017-10-13



