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Bucorvus abyssinicus (Abyssinian ground hornbill) genome, bBucAby1, primary haplotype

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NIAID Data Ecosystem2026-05-01 收录
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https://www.ncbi.nlm.nih.gov/sra/SRP487804
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The Abyssinian ground hornbill is found in the northern sub-Sahara Africa, in savanna and sub-desert scrub areas. This assembly has been produced as part of the G10K-VGP project. Sequencing was conducted with Pacific long reads, Bionano optical maps, and 10X Genomics libraries at the Rockefeller University Vertebrate Genomes Lab led by Olivier Fedrigo, HiC at Arima Genomics, and Illumina sequencing at NovaGene. Genome assembly was conducted by the Olivier Fedrigo and Marcela Uliano da Silva, and supervised by Arang Rhie, using the VGP 1.5 pipeline. The primary haplotype was assembled to chromosomes, whereas the alternate just as contigs. Funding was raised by Tom Gilbert and Erich Jarvis from B10K contributors and HHMI. The raw data and assembly are currently under a G10K-VGP publication embargo until removed from this description, following the G10K data use policy at the following URL: https://genome10k.soe.ucsc.edu/about/data_use_policy

阿比西尼亚地犀鸟(Abyssinian ground hornbill)分布于撒哈拉以南非洲北部的稀树草原与亚荒漠灌丛区域。本基因组组装为G10K-VGP项目(G10K-VGP project)的组成部分。测序工作由奥利维耶·费德里戈领衔的洛克菲勒大学脊椎动物基因组实验室开展,采用Pacific长读长测序、Bionano光学图谱(Bionano optical maps)及10X Genomics文库(10X Genomics libraries);Hi-C测序由Arima Genomics完成,NovaGene承担了Illumina测序任务。基因组组装由奥利维耶·费德里戈与玛塞拉·乌利亚诺·达席尔瓦实施,由阿兰·里监督,使用VGP 1.5组装流程完成。其中主单体型已组装至染色体水平,而备用单体型仅组装为重叠群(contigs)。本项目资金由汤姆·吉尔伯特与埃里克·贾维斯从B10K捐赠者及霍华德·休斯医学研究所(HHMI)处募集。原始测序数据与基因组组装结果目前处于G10K-VGP出版禁运期,需遵循G10K数据使用政策,该限制将持续至本描述移除相关内容为止,政策网址为https://genome10k.soe.ucsc.edu/about/data_use_policy
创建时间:
2024-02-02
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