Transcriptome analysis of reticulated platelets reveals a prothrombotic profile [mRNA-Seq]
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https://www.ncbi.nlm.nih.gov/sra/SRP185700
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To compare immature and mature platelet transcriptome Methods: reticulated or immature platelets(RPs) were defined as the platelets with the highest thiazole orange staining intensity (15% highest, RNAhigh) according to previous experiences and mature platelets were defined as the platelet with the 30% lowest thiazole orange staining intensity (RNAlow) and sorted (supplemental Figure S1D). We detected more than 1700 differentially expressed gene, incluning activation receptors RPs have a prothrombotic transcriptomic profile Overall design: Platelets RNA was acquired frome healthy donors. And analyzed using using NextSeq-500
为对比未成熟血小板与成熟血小板的转录组特征。方法:根据既往研究经验,将噻唑橙染色强度最高的15%血小板定义为网状血小板或未成熟血小板(reticulated or immature platelets, RPs),即RNA高表达组(RNAhigh);将噻唑橙染色强度最低的30%血小板定义为成熟血小板(mature platelets),即RNA低表达组(RNAlow),并对两组血小板进行分选(补充图S1D)。本研究共检测到1700余个差异表达基因,其中包含活化受体;未成熟血小板具有促血栓形成的转录组特征。实验总体设计:从健康供体中获取血小板RNA,并使用NextSeq-500平台进行测序分析。
创建时间:
2019-09-24



