Additional file 2 of OMSV enables accurate and comprehensive identification of large structural variations from nanochannel-based single-molecule optical maps
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https://springernature.figshare.com/articles/dataset/Additional_file_2_of_OMSV_enables_accurate_and_comprehensive_identification_of_large_structural_variations_from_nanochannel-based_single-molecule_optical_maps/5660782
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SV lists from the CEU (Northern Europeans from Utah) trio. This file provides the SVs identified by OMSV from the CEU trio. The first three sheets list the indels identified from NA12878, NA12891, and NA12892, respectively. The fourth sheet lists the union of these three lists. The fifth sheet lists all the sites with multiple indels called at the same site (two insertions, two deletions, or one insertion and one deletion). The sixth sheet lists the high-confidence indels and non-indels for evaluating Mendelian concordance. The last sheet lists the complex SVs. (XLSX 570 kb)
本数据集为CEU(犹他州北欧裔北方欧洲人)三人组的结构变异(Structural Variant,SV)列表,其中所有结构变异均由OMSV从该CEU三人组中鉴定得到。前三个工作表分别列出了从NA12878、NA12891与NA12892中鉴定得到的插入缺失变异(insertions-deletions,以下简称indels);第四个工作表收录了上述三个列表的合并集;第五个工作表列出了所有在同一位点被检出多个插入缺失变异的位点,涵盖两处插入、两处缺失,或一处插入与一处缺失的情况;第六个工作表收录了用于评估孟德尔一致性的高置信度插入缺失变异与非插入缺失变异;最后一个工作表收录了复杂结构变异。(XLSX格式,文件大小570 KB)
提供机构:
figshare
创建时间:
2017-12-02



