Descriptive statistics for validation of Drosophila melanogaster genome sequence data

The PercentMapped column is obtained from the output of samtools flagstat using BAM files of mapped reads generated by bowtie2. The WolbachiaDepth, WolbachiaBreadth and PredictedInfectionStatus columns are obtained from the output of bedtools genomecov using BAM files of mapped reads generated by bowtie2. The ExperimentalInfectionStatus column is obtained from the results of Verspoor and Haddrill (2011). All other columns are obtained from the output of fastQC on the raw, unmapped reads.

PercentMapped列由samtools flagstat的输出结果获得，该输出使用bowtie2生成的比对读段（mapped reads）的BAM文件。WolbachiaDepth、WolbachiaBreadth及PredictedInfectionStatus列由bedtools genomecov的输出结果获得，同样使用bowtie2生成的比对读段BAM文件。ExperimentalInfectionStatus列来自Verspoor与Haddrill（2011）的研究结果。其余所有列均来自对原始未比对读段（unmapped reads）进行fastQC分析的输出结果。