Extended data for Fig 3, showing the results of the mixed viral analysis with altered parameters for k, s, and unique reads.

The sample (Patient 1–5), query strain (EBV, HIV-1, U21941, FR751039, and TOTAL HPV as sum of U21941 and FR751039), expected single end (SE) number of reads, expected paired end (PE) number of read pairs, k-mer length, step size, boolean value for unique read parameter (UniqRead), FlexTyper Single-End count, FlexTyper Paired-End count, Centrifuge paired-end count, and Kraken2 Paired-end count.
(XLSX)

本数据集涵盖以下字段：样本（患者1至5号）、查询序列株（EBV、HIV-1、U21941、FR751039，以及由U21941与FR751039求和得到的总HPV）、预期单端（SE）测序读段数、预期双端（PE）测序读对数量、k-mer长度、步长、唯一读段参数（UniqRead）的布尔值、FlexTyper单端计数、FlexTyper双端计数、Centrifuge双端计数以及Kraken2双端计数。（数据格式为XLSX）