Additional file 7: of Wolf outside, dog inside? The genomic make-up of the Czechoslovakian Wolfdog

Table S1a. Wolf-excess genes surrounding outlier wolf-like SNPs (OWS) from PCAdmix. Table S1b. Enrichment in gene ontology categories (EGO) of wolf-excess genes surrounding the OWS from PCAdmix. Table S1c. Dog-excess genes surrounding outlier dog-like SNPs (ODS) from PCAdmix. Table S1d. EGO of dog-excess genes surrounding ODS from PCAdmix. Table S2a. Dog-excess genes included in genomic regions within ROHs. Table S2b. EGO of the dog-excess genes included in genomic regions within ROHs. Table S3a. Wolf-excess genes surrounding OWS from the lowest FST between CWDs and Carpathian wolves. Table S3b. EGO of wolf-excess genes surrounding OWS from the lowest FST between CWDs and Carpathian wolves. Table S3c. Dog-excess genes surrounding ODS from the lowest FST between CWDs and German Shepherds. Table S3d. EGO of dog-excess genes surrounding ODS from the lowest FST between CWDs and German Shepherds. Table S4a. Wolf-excess genes surrounding the outlier wolf-like 10-SNP blocks identified from the lowest FST between CWDs and Carpathian wolves. Table S4b. EGO of the wolf-excess genes surrounding the outlier wolf-like 10-SNP blocks identified from the lowest FST between CWDs and Carpathian wolves. Table S4c. Dog-excess genes surrounding outlier dog-like 10-SNP blocks from the lowest FST between CWDs and German Shepherds. Table S4d. EGO of dog-excess genes surrounding outlier dog-like 10-SNP blocks from the lowest FST between CWDs and German Shepherds. Table S5a. Wolf-excess genes surrounding OWS from BGC alpha parameter. Table S5b. EGO of wolf-excess genes surrounding OWS from BGC alpha parameter. Table S5c. Dog-excess genes surrounding ODS from BGC alpha parameter. Table S5d. EGO of dog-excess genes surrounding ODS from BGC alpha parameter. Table S6a. Wolf-excess surrounding OWS from BayeScan. Table S6b. EGO of wolf-excess genes surrounding OWS from BayeScan. Table S6c. Dog-excess genes surrounding ODS from BayeScan. Table S6d. EGO of dog-excess genes surrounding ODS from BayeScan. (XLSX 781 kb)

表S1a. 基于PCAdmix分析的类狼异常单核苷酸多态性位点（outlier wolf-like SNPs, OWS）侧翼的狼富集基因
表S1b. 基于PCAdmix分析的OWS侧翼狼富集基因的基因本体论类别富集分析（EGO）
表S1c. 基于PCAdmix分析的类犬异常单核苷酸多态性位点（outlier dog-like SNPs, ODS）侧翼的犬富集基因
表S1d. 基于PCAdmix分析的ODS侧翼犬富集基因的EGO分析
表S2a. 包含于纯合子连续区域（Run of Homozygosity, ROHs）内基因组区域中的犬富集基因
表S2b. 包含于ROHs内基因组区域中的犬富集基因的EGO分析
表S3a. 基于CWDs与喀尔巴阡狼间最低固定指数（Fixation Index, FST）筛选的OWS侧翼的狼富集基因
表S3b. 基于CWDs与喀尔巴阡狼间最低FST筛选的OWS侧翼狼富集基因的EGO分析
表S3c. 基于CWDs与德国牧羊犬间最低FST筛选的ODS侧翼的犬富集基因
表S3d. 基于CWDs与德国牧羊犬间最低FST筛选的ODS侧翼犬富集基因的EGO分析
表S4a. 基于CWDs与喀尔巴阡狼间最低FST筛选得到的类狼异常10-SNP连锁区块侧翼的狼富集基因
表S4b. 基于CWDs与喀尔巴阡狼间最低FST筛选得到的类狼异常10-SNP连锁区块侧翼狼富集基因的EGO分析
表S4c. 基于CWDs与德国牧羊犬间最低FST筛选得到的类犬异常10-SNP连锁区块侧翼的犬富集基因
表S4d. 基于CWDs与德国牧羊犬间最低FST筛选得到的类犬异常10-SNP连锁区块侧翼犬富集基因的EGO分析
表S5a. 基于BGCα参数（BGC alpha parameter）筛选的OWS侧翼的狼富集基因
表S5b. 基于BGCα参数筛选的OWS侧翼狼富集基因的EGO分析
表S5c. 基于BGCα参数筛选的ODS侧翼的犬富集基因
表S5d. 基于BGCα参数筛选的ODS侧翼犬富集基因的EGO分析
表S6a. 基于BayeScan软件筛选的OWS侧翼的狼富集基因
表S6b. 基于BayeScan软件筛选的OWS侧翼狼富集基因的EGO分析
表S6c. 基于BayeScan软件筛选的ODS侧翼的犬富集基因
表S6d. 基于BayeScan软件筛选的ODS侧翼犬富集基因的EGO分析
（XLSX格式，大小781 KB）