Additional file 11 of Systematic single-cell analysis reveals dynamic control of transposable element activity orchestrating the endothelial-to-hematopoietic transition
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Additional file 11: Table S1. Differentially accessible TEs between pre-HECs and VECs/AECs. Table S2. Differentially accessible TEs between pre-HECs and HECs/HSCs. Table S3. Cell type-specific open TEs. Table S4. Closest genes and annotations of differentially accessible peaks in mouse EHT. Table S5. Co-access scores of cell type-specific peak pairs. Table S6. Enriched motifs of TE associated cell type-specific peaks (TEPs). Table S7. Activated TF-target pairs during EHT (TFs are corresponding to TE-related motifs). Table S8. GO enrichment results of cell type-specific network modules of TE-bound TFs and downstream targets.
补充文件11:表S1。前造血内皮细胞(pre-HECs)与血管内皮细胞/心房内皮细胞(VECs/AECs)之间的差异开放转座因子(Transposable Elements, TEs)。表S2。前造血内皮细胞与造血内皮细胞/造血干细胞(HECs/HSCs)之间的差异开放转座因子。表S3。细胞类型特异性开放转座因子。表S4。小鼠内皮细胞向造血细胞转化(Endothelial-to-Hematopoietic Transition, EHT)过程中差异开放峰的邻近基因及其注释信息。表S5。细胞类型特异性峰对的共开放评分。表S6。与转座因子相关的细胞类型特异性开放峰(TE-associated peaks, TEPs)的富集基序。表S7。内皮细胞向造血细胞转化过程中激活的转录因子-靶基因对(转录因子对应转座因子相关基序)。表S8。结合转座因子的转录因子及其下游靶标所构成的细胞类型特异性网络模块的基因本体(Gene Ontology, GO)富集分析结果。
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2024-09-11



