MOESM7 of Water-deficit responsive microRNAs in the primary root growth zone of maize

Additional file 7: Table S7. List of miRNA-regulated gene transcripts detected in the primary root growth zone by degradome sequencing, and EdgeR-calculated fold-change value. The predicted miRNA-target transcript interactions that are conserved in other species are listed in red. The fold-change value of significantly differentially regulated transcripts (FDR < 0.05) is highlighted with yellow. Transcripts that were not detected in the RNA-seq libraries are indicated with an #NA. Treatment Library—the library/libraries in which the target transcript was identified: WW, − 0.3, − 1.6 = A; WW, − 0.3 = B; WW, − 1.6 = C; − 0.3, − 1.6 = D; WW only = W; − 0.3 only = M; − 1.6 only = S; miRNA ID—the ID of the miRNA predicted to regulate the transcript; Transcript ID—the AGPv3 transcript identifier; − 0.3 MPa/26 h—abundance of the transcript in the mild water deficit treatment relative to its abundance in the well-watered treatment (log2FC); − 1.6 MPa/26 h—abundance of the transcript in the severe water deficit treatment relative to its abundance in the well-watered treatment (log2FC).

附加文件7：表S7。通过降解组测序（degradome sequencing）在主根生长区检测到的微小RNA（miRNA）调控基因转录本列表，以及通过EdgeR计算得到的折叠变化值。在其他物种中保守的预测miRNA-靶转录本互作关系以红色字体标注。经显著性差异调控的转录本（错误发现率（False Discovery Rate，FDR）<0.05）的折叠变化值以黄色高亮显示。在RNA测序（RNA-seq）文库中未检测到的转录本以#NA标注。处理组文库——用于鉴定靶转录本的文库/文库组合：正常供水（WW）、−0.3、−1.6对应A；正常供水（WW）、−0.3对应B；正常供水（WW）、−1.6对应C；−0.3、−1.6对应D；仅正常供水（WW）对应W；仅−0.3对应M；仅−1.6对应S；miRNA ID——预测调控该转录本的miRNA的编号；转录本ID——AGPv3转录本标识符；−0.3 MPa/26 h——轻度水分胁迫处理下转录本的丰度相对于正常供水处理下的丰度比值（log2FC）；−1.6 MPa/26 h——重度水分胁迫处理下转录本的丰度相对于正常供水处理下的丰度比值（log2FC）。