Additional file 5 of Population transcriptogenomics highlights impaired metabolism and small population sizes in tree frogs living in the Chernobyl Exclusion Zone
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https://springernature.figshare.com/articles/dataset/Additional_file_5_of_Population_transcriptogenomics_highlights_impaired_metabolism_and_small_population_sizes_in_tree_frogs_living_in_the_Chernobyl_Exclusion_Zone/26989030
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Additional file 5: Table S3. Summary of SNPs correlated with ITDR in the CEZ. The result of tblastx giving the closest human Uniprot orthologue is indicated, as well as the results from SNP calling with GATK, variant prediction from SnpEff and the DEG obtained by DESeq2.
附加文件5:表S3。CEZ区域内与ITDR相关的单核苷酸多态性(Single Nucleotide Polymorphisms, SNPs)汇总结果。本表格标注了通过tblastx比对得到的与人类UniProt数据库中最相近的直系同源基因的结果,同时也列出了使用GATK(Genome Analysis Toolkit, 基因组分析工具包)进行单核苷酸多态性检测、SnpEff进行变异预测,以及通过DESeq2得到的差异表达基因(Differentially Expressed Genes, DEGs)的相关分析结果。
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figshare
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2024-09-11



