Outputs from fitted models across the cross-validation scenarios for 'Space-time species distribution modeling with opportunistic presence-only data: a case study of passerines in a protected area'
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https://zenodo.org/record/12544211
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资源简介:
Three Zenodo repositories are linked to the preprint Space-time Species Distribution Modeling for Opportunistic Presence-Only Data: A Case Study of Passerines in a Protected Area (Lasgorceux et al., unpublished, https://hal.science/hal-04616332):
Data, scripts and, code (Lasgorceux et al., Zenodo, https://doi.org/10.5281/zenodo.12545052)
Outputs from fitted models across the cross-validation scenarios (Lasgorceux et al., Zenodo, https://doi.org/10.5281/zenodo.12544212)
Supplementary information at (Lasgorceux et al., Zenodo, https://doi.org/10.5281/zenodo.12541412)
This repository contains the outputs from fitted models across the cross-validation scenarios.
In the folder Ouputs_cross_validation, each species is represented by a .RData file, numbered from 1 to 77 (excluding 7, which corresponds to Bombycilla garrulus; see the preprint for details). This dataset is specifically used to generate Figure 1, which shows the AUC of various cross-validation scenarios. To reproduce this figure in R, place all the files in the Results/Fitted_models folder and run the Models_Outputs.R script located in the Results folder of Lasgorceux et al., Zenodo, https://doi.org/10.5281/zenodo.12545052.
Note: These data have been separated due to memory requirements (23.14GB).
本预印本《面向仅基于偶遇观测数据的时空物种分布建模——以保护区内雀形目(Passerines)鸟类为例》(Lasgorceux等人,未发表,https://hal.science/hal-04616332)关联了3个Zenodo仓储,具体如下:
1. 数据、脚本及代码(Lasgorceux等人,Zenodo,https://doi.org/10.5281/zenodo.12545052)
2. 交叉验证场景下拟合模型的输出结果(Lasgorceux等人,Zenodo,https://doi.org/10.5281/zenodo.12544212)
3. 补充材料(Lasgorceux等人,Zenodo,https://doi.org/10.5281/zenodo.12541412)
本仓储存储交叉验证场景下拟合模型的输出结果。在Ouputs_cross_validation文件夹中,每个物种对应一个编号为1至77的.RData文件(编号7对应雪松太平鸟(Bombycilla garrulus),详细说明详见预印本)。本数据集专用于生成图1,该图展示了各类交叉验证场景下的受试者工作特征曲线下面积(Area Under the Receiver Operating Characteristic Curve,AUC)。若需在R语言环境中复现该图,请将所有文件置于Results/Fitted_models文件夹内,并运行Lasgorceux等人所提供的Zenodo仓储(https://doi.org/10.5281/zenodo.12545052)中Results文件夹内的Models_Outputs.R脚本。
注意:受内存容量限制(总数据量为23.14GB),本数据集已拆分存储。
创建时间:
2024-07-02



