Supplementary files for Reconstructing Kinetic Models for Dynamical Studies of Metabolism using Generative Adversarial Networks, additional part 2
收藏资源简介:
<strong>Supplementary files containing datasets needed to reproduce the results of the manuscript "Reconstructing Kinetic Models for Dynamical Studies of Metabolism using Generative Adversarial Networks" by S. Choudhury et al.</strong> The code to use with these data and reproduce the manuscript results is available at https://github.com/EPFL-LCSB/rekindle and https://gitlab.com/EPFL-LCSB/rekindle. The execution of parts of this code is dependent on the SkimPy toolbox (https://github.com/EPFL-LCSB/skimpy). Refer to the readme files on the REKINDLE code repositories for more details. <strong>Temporal evolution of perturbations in non-linear ordinary differential equations</strong> <strong>ode_solutions_physiology1_ORACLE.zip</strong> - contains 100 subfolders, each subfolder containing the time-series evolution data of 1000 kinetic models parameterized by ORACLE generated parameter sets for physiology 1, each of the 1000 models having a random perturbation. The detailed instructions and the main body of the dataset is available here: https://zenodo.org/record/5803120



