Additional file 20: Table S8. of Genetic properties of the MAGIC maize population: a new platform for high definition QTL mapping in Zea mays

Suggestive loci (P <0.63) for days to pollen shed (PS), ear height (EH), plant height (PH), and grain yield (GY). Each row reports the phenotype (Trait), the covariates (Cov) eventually used in the QTL scan, the name of the marker (Marker) and chromosome (Chr) of the current association, the genomic position (in bp) of the interval determined by a 2 LOD drop from the highest association (Top), and the left (Left bound) and right (Right bound) bounds of this interval. The percent of variance explained (Variance) and the maximum LOD score are also shown. To avoid duplication, when a peak position was unchanged after scanning with a covariate, the latter scan is the only reported. QTL are listed individually if separated by at least 50 markers with LOD score below the suggestive threshold. (XLSX 14 kb)

本数据集包含散粉天数（days to pollen shed, PS）、穗位高（ear height, EH）、株高（plant height, PH）及籽粒产量（grain yield, GY）四个性状的提示性数量性状位点（quantitative trait locus, QTL），其关联显著性P值均小于0.63。每一行依次记录了目标性状（Trait）、QTL扫描中最终使用的协变量（covariates, Cov）、本次关联分析所用分子标记（Marker）的名称及所在染色体（chromosome, Chr）、由最高关联信号位点处向下偏移2个LOD值所界定的区间的基因组位置（单位：碱基对, bp），以及该区间的左边界（Left bound）与右边界（Right bound）。同时还列出了该位点的表型变异解释率（Variance）与最大LOD分值。为避免重复统计，当使用协变量开展扫描后峰值位点未发生改变时，仅需报告本次带协变量的扫描结果。若两个QTL位点之间至少间隔50个LOD分值低于提示性阈值的分子标记，则将二者分别单独列出。（XLSX格式，文件大小14 kb）