TABLE 1 in Microfungi associated with dead caterpillars and spiders in Xishuangbanna Tropical Botanical Garden, P. R. China
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TABLE 1. The PCR conditions and primers used in this study.
LocusDefinitionPrimerPrimer DNA sequence (5'-3')Annealing (PCR)Referencesgapdhglyceraldehyde 3-phosphate dehydrogenasegpd1CAACGGCTTCGGTCGCATTGgpd2GCCAAGCAGTTGGTTGTGCa60 °C, 30 s bBerbee et al. (1999)ITSinternal transcribed spacerITS4TCCGTAGGTGAACCTGCGGITS5TCCTCCGCTTATTGATATGCa55 °C, 50 sbWhite et al. (1990)LSUnuclear ribosomal large subunitLR0RGTACCCGCTGAACTTAAGCLR5ATCCTGAGGGAAACTTCa55 °C, 50 sbVilgalys & Hester (1990)rpb1DNA-dependent RNA polymerase II largest subunitAfGARTGYCCDGGD CAYTTYGGCrCGCATTCTTTCCATTAa49 °C, 1 minbLu et al. (2013)SSU18S ribosomal RNANS1GTAGTCATATGCTTGTCTCNS4CTTCCGTCAATTCCTTTAAGa55 °C, 50 sbWhite et al. (1990)tef1-αtranslation elongation factor 1 alpha983FGCYCCYGGHCAYCGTGAYTTYAT2218RATGACACCRACRGCRACRGTYTGa56 °C, 50 s bRehner & Buckley (2005)
表1 本研究使用的聚合酶链式反应(PCR)条件与引物
基因座 功能定义 引物 引物DNA序列(5'→3') 退火(PCR)条件 参考文献
gapdh 甘油醛-3-磷酸脱氢酶(glyceraldehyde 3-phosphate dehydrogenase) gpd1 CAACGGCTTCGGTCGCATTG gpd2 GCCAAGCAGTTGGTTGTGC a60℃,30s bBerbee等(1999)
ITS 内转录间隔区(internal transcribed spacer) ITS4 TCCGTAGGTGAACCTGCGG ITS5 TCCTCCGCTTATTGATATGC a55℃,50s bWhite等(1990)
LSU 核核糖体大亚基(nuclear ribosomal large subunit) LR0R GTACCCGCTGAACTTAAGC LR5 ATCCTGAGGGAAACTTC a55℃,50s bVilgalys & Hester(1990)
rpb1 DNA依赖的RNA聚合酶II最大亚基(DNA-dependent RNA polymerase II largest subunit) AfGARTGYCCDGGD CAYTTYGGCr CGCATTCTTTCCATTA a49℃,1min bLu等(2013)
SSU 18S核糖体RNA(18S ribosomal RNA) NS1 GTAGTCATATGCTTGTCTC NS4 CTTCCGTCAATTCCTTTAAG a55℃,50s bWhite等(1990)
tef1-α 翻译延伸因子1α(translation elongation factor 1 alpha) 983F GCYCCYGGHCAYCGTGAYTTYAT 2218R ATGACACCRACRGCRACRGTYT a56℃,50s bRehner & Buckley(2005)
创建时间:
2025-04-05



