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Comparison of aggregation predictions and experimental available data for human globular proteins and proximity of aggregation-prone regions to predicted and real interfaces.

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NIAID Data Ecosystem2026-03-07 收录
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https://figshare.com/articles/dataset/_Comparison_of_aggregation_predictions_and_experimental_available_data_for_human_globular_proteins_and_proximity_of_aggregation_prone_regions_to_predicted_and_real_interfaces_/557376
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1Percentage of residues in the aggregation-prone region at less than 3 Å from a protein predicted interaction residue. 2Percentage of residues in the aggregation-prone region at less than 3 Å from a residue located at the interface of the following complexes: β2-microglubulin in complex with HLA heavy chain [1DUZ] and with HFE [1A6Z]. Native tetrameric structure of transthyretin (PDB code 1TTA). Dimeric structure of SOD1 (PDB code 2C9V). Lysozyme in complex with a camelid antibody (PDB code 1OP9). Dimeric structure of Immunoglobulin LC variable domain (PDB code 2Q20). HCs and LCs of a IgG1 human immunoglobulin (PDB code 1HZH). 1,2In brackets the percentage of residues in the aggregation-prone region close to a random surface of the same size than the considered interface.

1. 易聚集区域(aggregation-prone region)内,与蛋白质预测互作残基距离小于3埃的残基占比。 2. 易聚集区域内,与以下复合物界面处残基距离小于3埃的残基占比:与人类白细胞抗原(HLA)重链结合的β2微球蛋白(β2-microglobulin,PDB编号1DUZ)以及与HFE结合的β2微球蛋白(PDB编号1A6Z);运甲状腺素蛋白的天然四聚体结构(PDB编号1TTA);超氧化物歧化酶1(SOD1)的二聚体结构(PDB编号2C9V);与骆驼科抗体结合的溶菌酶(PDB编号1OP9);免疫球蛋白轻链可变结构域的二聚体结构(PDB编号2Q20);人IgG1免疫球蛋白的重链(HCs)与轻链(LCs)(PDB编号1HZH)。 针对上述1、2两项指标,括号内的数值为易聚集区域内,与所研究界面尺寸相同的随机表面接近的残基占比。
创建时间:
2013-02-21
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