Additional file 1 of Distinct colonization patterns and cDNA-AFLP transcriptome profiles in compatible and incompatible interactions between melon and different races of Fusarium oxysporum f. sp. melonis

Additional file 1:Complete list of melon genes modulated by infection with avirulent (ISPaVe1070 race1) or virulent (ISPaVe1018 and ISPaVe1083 strains of race 1,2) strains of Fusarium oxysporum f. sp. melonis, organized by clusters as defined in the results section. Identification numbers (ID) correspond to the progressive numbering of bands in the gels. The primer combination used to visualize each band (Bst-Mse column) and the corresponding length of the fragment are reported, along with the accession number retrieved from the Melon Unigene or Uniprot database, the annotation, the corresponding blast score, and the functional category to which each transcript was assigned. In addition, the file reports the expression profile of each transcript, estimated on the basis of the band intensity with a score ranging from -3 to 3, in comparison to the corresponding band in the mock-inoculated controls. (XLS 184 KB)

附加文件1：受无毒型（ISPaVe1070 生理小种1）或致病型（1、2号生理小种的ISPaVe1018与ISPaVe1083菌株）尖孢镰刀菌甜瓜专化型（Fusarium oxysporum f. sp. melonis）侵染后表达发生调控的甜瓜基因完整列表，按本研究结果章节中定义的聚类进行整理。编号（ID）对应凝胶电泳条带的连续编号。本文件同时列出了用于可视化每条条带的引物组合（Bst-Mse列）、对应片段的长度，以及从甜瓜Unigene或UniProt数据库中检索得到的登录号、基因注释信息、相应的BLAST比对得分，以及每个转录本所归属的功能类别。此外，本文件还报告了各转录本的表达谱：该表达谱基于条带强度进行估算，得分范围为-3至3，与假接种对照组中的对应条带进行比较。（XLS格式，大小184 KB）