List of the identified DE genes in the first, more stringent, dataset.
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Annotation of the DE genes, with the differential expression inferred by bioinformatics predictions (log2 FC RNA-seq) and RT-qPCR analysis (log2 FC RT-qPCR).aGene ID based on Phytozome v8;bMost significant enriched GO terms to which the genes belong (when available);cManual annotation with blast2go;dBest Arabidopsis TAIR10 hit based on P. trichocarpa v2 annotation info file (when available the common name for the Arabidopsis gene is used);eP-value based on a t-test of relative expression of three biological replicates between control and treatment for RT-qPCR data.List of the identified DE genes in the first, more stringent, dataset.
差异表达基因(Differentially Expressed Genes, DEGs)的注释信息,其差异表达水平通过生物信息学预测(log₂ FC RNA-seq)与实时定量聚合酶链反应(Reverse Transcription Quantitative Polymerase Chain Reaction, RT-qPCR)分析(log₂ FC RT-qPCR)推断得到。
a. 基因ID基于Phytozome v8数据库;
b. 基因所属的最显著富集基因本体(Gene Ontology, GO)条目(如有);
c. 通过blast2go完成的手动注释;
d. 基于毛果杨(*Populus trichocarpa*)v2版本注释信息文件匹配得到的最优拟南芥TAIR10同源基因(若可获取相关信息,将使用该拟南芥基因的通用名称);
e. 针对RT-qPCR数据,基于对照组与处理组三组生物学重复的相对表达量进行t检验所得的P值;
本列表为首个更严格筛选数据集的已鉴定差异表达基因列表。
创建时间:
2015-12-03



