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Genome-wide profiling of nucleosome sensitivity and chromatin accessibility in D. melanogaster [MNase]

ChEBI2015-09-17 更新2026-07-12 收录

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数据链接：

https://www.ebi.ac.uk/biostudies/ArrayExpress/studies/E-GEOD-69177 数据链接链接失效反馈

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资源简介：

Genome-wide profiling of nucleosome sensitivity and chromatin accessibility in D. melanogaster [MNase]

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创建时间：

2015-09-17

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DNA序列特征关联

The correlation coefficients between four nucleotides and the nucleosome occupancy across five organisms.

NIAID Data Ecosystem90

CTCF/CP190 and ISWI dependent regulation of nucleosome occupancy [MNase-seq]

染色质结构

核小体定位

MNase-seq was performed in order to analyze changes in nucleosomal occupancy after depletion of CTCF/P190 and ISWI from Drosophila S2 cells Overall design: MNase-seq from Drosophila S2 nuclei after CT

NIAID Data Ecosystem60

Global structure and mechanical properties of a 10-bp nucleosome positioning motif

核小体定位

DNA机械性能

The method of DNA cyclization kinetics reveals special properties of the TATAAACGCC sequence motif found in DNA sequences that have high affinity for core histones. Replacement of 30 bp of generic DNA

PubMed Central2000-11-28 更新50

Long-range single-molecule mapping of chromatin accessibility in eukaryotes

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长读长测序

Mapping open chromatin regions has emerged as a widely used tool for identifying active regulatory elements in eukaryotes. However, existing approaches, limited by reliance on DNA fragmentation and sh

NIAID Data Ecosystem70

Nucleosomal signatures impose nucleosome positioning in coding and non-coding sequences in the genome. Nucleosomal signatures impose nucleosome positioning in coding and non-coding sequences in the genome

核小体定位

染色质序列决定

In the yeast genome, a large proportion of nucleosomes occupy well-defined positions. While the contribution of chromatin remodelers and DNA binding proteins to maintain this organization is well esta

NIAID Data Ecosystem60

Genome-wide profiling of nucleosome sensitivity and chromatin accessibility in D. melanogaster [MNase]

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