Data For Purge Haplotigs Case Study

Data for the Purge Haplotigs case study. <strong>arabidopsis/ cabsauv/ cpyxidata/ zfinch/</strong> All files related to the FALCON Unzip assemblies for Purge Haplotigs processing, processing with a similar tool, repeat annotation, BUSCO and Quast analysis, genome alignments, and short read mapping. All sequencing reads are available from the Sequence Read Archive and are therefore omitted. BAM alignment files are omitted due to size constraints. These are available on request, or can be generated following the directions in the paper's supplementary workflow document. <strong>arabidopsis_trio_comparison/</strong> Genome alignments and comparisons using the Arabidopsis trio dataset.