Additional file 6: of Application of high-throughput amplicon sequencing-based SSR genotyping in genetic background screening

Table S5 Valid and comparable SSRs in DXT and DXB. The valid SSR loci in each sample are those SSR loci covered by at least 10 reads and with stutter ratios lower than 0.5. Comparable SSRs between two samples are those SSR loci that are valid in both samples. The genotype is the major genotype of the SSR locus, represented as the repeat unit with the repeat number, e.g., CGC4. The coverage represents the number of reads that support the genotype. The stutter ratio represents the ratio of the read numbers of the minor and major genotypes. (XLSX 37 kb)

附表S5：DXT与DXB样本中有效且可比对的简单序列重复（Simple Sequence Repeats，SSRs）。各样本中的有效SSR位点为至少被10条测序读段覆盖、且滑移比率低于0.5的SSR位点；两个样本间的可比对SSR位点指在两个样本中均为有效的SSR位点。基因型为SSR位点的主要基因型，以重复单元加重复次数的形式表示，例如CGC4。覆盖度指支持该基因型的测序读段数量。滑移比率指次要基因型与主要基因型的读段数之比。（XLSX 37 kb）