Additional file 2: of Transcriptome and DNA methylome reveal insights into yield heterosis in the curds of broccoli (Brassica oleracea L var. italic)

Data set 1. DEGs detected by pairwise comparison in NKR-06 and two parents. Data set 2. DEGs detected by pairwise comparison in Bro-12 and two parents. Data set 3. DEGs in the hybrids compared with both parents. Data set 4. Non-additively expressed genes in two hybrid triads. Data set 5. GO functional annotation of the DEGs in the NKR-04/− 05/− 06 hybrid triad. Data set 6. GO functional annotation of the DEGs in the Bro-10/− 11/− 12 hybrid triad. Data set 7. DNA methylation of CG and CHG sites detected in the hybrid broccoli and their parents. Data set 8. Differential DNA methylation levels of CG and CHG sites in NKR-06 hybrid triad. Data set 9. Genes with different methylation levels in NKR-06 hybrid triad. Data set 10 Differential DNA methylation levels of CG and CHG sites in Bro-12 hybrid triad. Data set 11. Genes with differential methylation levels in Bro-12 hybrid triad. (ZIP 5944 kb)

数据集1：通过两两比对分析NKR-06及其两个亲本得到的差异表达基因（Differentially Expressed Genes, DEGs）。数据集2：通过两两比对分析Bro-12及其两个亲本得到的差异表达基因。数据集3：杂交种与双亲比对得到的差异表达基因。数据集4：两个杂交三联体中的非加性表达基因。数据集5：NKR-04/−05/−06杂交三联体中差异表达基因的基因本体论（Gene Ontology, GO）功能注释。数据集6：Bro-10/−11/−12杂交三联体中差异表达基因的基因本体论功能注释。数据集7：杂交西兰花及其亲本中检测到的CG与CHG位点的DNA甲基化水平。数据集8：NKR-06杂交三联体中CG与CHG位点的差异DNA甲基化水平。数据集9：NKR-06杂交三联体中甲基化水平存在差异的基因。数据集10：Bro-12杂交三联体中CG与CHG位点的差异DNA甲基化水平。数据集11：Bro-12杂交三联体中甲基化水平存在差异的基因。（压缩包大小：5944 KB）