Comparison of DNA compression performance on a standard dataset.
收藏Figshare2015-12-02 更新2026-04-29 收录
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Note: Values in each column (except for ) refer to bit per base (bpb). refers to the respective minimum match length in the first pass and ‘Default’ column represents the compression results of COM-NONREF with default parameter (i.e., 25). The ‘’XM500’’ refers to the XM algorithm using at most 500 experts. ‘’COMPACT-seq’’ indicates one mode of our proposed method that uses only traditional sequential models followed by logistic regression model. The value of the best performance model is in bold font.
注:除(原文此处缺失列名)外,各列数值均以每碱基比特数(bit per base, bpb)为单位。该列指代首轮匹配阶段的最小匹配长度,而"Default"列代表采用默认参数(即25)的COM-NONREF算法的压缩结果。"XM500"指代最多使用500个专家的XM算法。"COMPACT-seq"为本研究提出方法的一种变体,仅采用传统序列模型后接逻辑回归(logistic regression)模型。性能最优模型的数值以粗体标注。
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2015-12-02



