Leishmania infantum genome_DNA-seq alignment
收藏doi.org2023-02-13 更新2025-03-24 收录
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http://doi.org/10.17632/gyw76rr399.1
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In 2017, our group assembled the Leishmania infantum (JPCM5) genome [Gonzalez-de la Fuente, S., Peiro-Pastor, R., Rastrojo, A., Moreno, J., Carrasco-Ramiro, F., Requena, J.M., and Aguado, B. (2017). Resequencing of the Leishmania infantum (strain JPCM5) genome and de novo assembly into 36 contigs. Sci Rep 7, 18050.]
The fasta file of this genome may be downloaded through the following Mendeley data: Requena, Jose M. (2021), “LINF_Genome sequence”, Mendeley Data, V1, doi: 10.17632/rb34cg9xk7.1.
Here, I am uploading the alignment of the Illumina DNA-seq reads generated during the genome assembly. This information may serve for checking the quality of the assembled genome and searching for sequence polymorphisms.
于2017年，本团队构建了利什曼原虫婴儿型（JPCM5）基因组[（Gonzalez-de la Fuente, S., Peiro-Pastor, R., Rastrojo, A., Moreno, J., Carrasco-Ramiro, F., Requena, J.M., 及Aguado, B. （2017）. 利什曼原虫婴儿型（菌株JPCM5）基因组重测序及其从头组装为36个连续片段。Sci Rep 7, 18050.）。该基因组的fasta文件可通过以下Mendeley数据获取：Requena, Jose M. （2021）, “LINF_Genome sequence”，Mendeley Data，V1，doi: 10.17632/rb34cg9xk7.1。在此，我上传了基因组组装过程中生成的Illumina DNA测序读段的比对信息。这些信息可用于评估组装基因组的质量以及搜索序列多态性。]
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