Protein half-life predictor data sets
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These data sets contain invivo and invitro murine protein half-lives. These files have been collected from the onlinerepository of the corresponding journals. Here are the lists of the files and their corresponding journals:Filename: AnalChem_72_p367_Brain.csv and AnalChem_72_p367_Liver.csv Journal:Guan S, Price JC, Ghaemmaghami S, Prusiner SB, Burlingame AL. Compartment modeling for mammalian protein turnover studies by stable isotope metabolic labeling. Anal Chem. 2012;84(9):4014-21.Filename:Nature_2011_Cell.csvJournal: Schwanhausser B, Busse D, Li N, Dittmar G, Schuchhardt J, Wolf J, et al. Global quantification of mammalian gene expression control. Nature. 2011;473(7347):337-42. Filename: MolSysBio_2013_Cell.csvJournal:Kristensen AR, Gsponer J, Foster LJ. Protein synthesis rate is the predominant regulator of protein expression during differentiation. Mol Syst Biol. 2013;9. doi: ARTN 689 Filename: Science_2016_Heart.csvJournal: Lau E, Cao Q, Ng DC, Bleakley BJ, Dincer TU, Bot BM, et al. A large dataset of protein dynamics in the mammalian heart proteome. Sci Data. 2016;3:160015. doi: 10.1038/sdata.2016.15. PubMed PMID: 26977904; PubMed Central PMCID: PMCPMC4792174.
本数据集包含体内(in vivo)和体外(in vitro)的小鼠蛋白质半衰期数据。所有文件均采集自对应期刊的在线仓储库。以下为各文件及其对应文献的列表:
1. 文件名称:AnalChem_72_p367_Brain.csv、AnalChem_72_p367_Liver.csv
对应文献:Guan S, Price JC, Ghaemmaghami S, Prusiner SB, Burlingame AL. 稳定同位素代谢标记法在哺乳动物蛋白质周转研究中的区室建模. 《分析化学(Analytical Chemistry)》, 2012;84(9):4014-21.
2. 文件名称:Nature_2011_Cell.csv
对应文献:Schwanhausser B, Busse D, Li N, Dittmar G, Schuchhardt J, Wolf J, 等. 哺乳动物基因表达调控的全局定量分析. 《自然(Nature)》, 2011;473(7347):337-42.
3. 文件名称:MolSysBio_2013_Cell.csv
对应文献:Kristensen AR, Gsponer J, Foster LJ. 蛋白质合成速率是分化过程中蛋白质表达的主要调控因子. 《分子系统生物学(Molecular Systems Biology)》, 2013;9. doi: ARTN 689
4. 文件名称:Science_2016_Heart.csv
对应文献:Lau E, Cao Q, Ng DC, Bleakley BJ, Dincer TU, Bot BM, 等. 哺乳动物心脏蛋白质组的蛋白质动态变化大型数据集. 《科学数据(Scientific Data)》, 2016;3:160015. doi: 10.1038/sdata.2016.15. PubMed PMID: 26977904; PubMed Central PMCID: PMCPMC4792174.
创建时间:
2017-06-26



