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Additional file 2: of Analysis of sea star larval regeneration reveals conserved processes of whole-body regeneration across the metazoa

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Table S1. RNA-Seq results. Table summarizing results of P. minata RNA-Seq experiments including each identified gene (“xloc”) along with a human-readable gene name and corresponding PMI accession based on Echinobase Pmin v1.0 annotations. For each gene, it is indicated whether it was found to be differentially expressed in any sample (“DE”) along with the fold change values for anterior and posterior regenerating fragments, relative to controls, for 0, 3, and 6 dpb. In addition, for each gene, if an ortholog was identified by reciprocal best blast in S. purpuratus, S. mediterranea, H. magnipapillata, or M. musculus, the accession of the identified ortholog is indicated. (CSV 4973 kb)

表S1:RNA测序(RNA-Seq)结果。本表格汇总了P. minata的RNA测序实验结果,涵盖各已鉴定基因("xloc")、可读基因名,以及基于Echinobase数据库Pmin v1.0版注释信息得到的对应PMI登录号。针对每个基因,表格将标注其是否在任意样本中被鉴定为差异表达("DE"),同时给出相较于对照组的再生前端与后端片段在断后第0、3、6天(dpb)的折叠变化值。此外,若某基因通过双向最佳BLAST比对在紫海胆(S. purpuratus)、地中海真涡虫(S. mediterranea)、水螅(H. magnipapillata)或小家鼠(M. musculus)中鉴定到直系同源基因,则标注该直系同源基因的登录号。(CSV格式,4973 KB)
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figshare
创建时间:
2019-02-23
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