Supplementary files for transcriptome profiling of pluripotent pig embryonic stem cells originating from uni- and biparental embryos

This dataset consists of the following files:<br>Supplementary file 1. Methodology description.<br>Dataset 2. List of normalized gene expression level (FPKM; ESCs and Embryos).<br>Dataset 3. Lists of differentially expressed genes (FC; ESCs and Embryos).<br>Table S1. Summary of cell samples for RNA-seq.<br>Table S2. Summary of alignment statistics for RNA-seq.<br>Table S3. Number of differentially expressed genes (DEGs) compared with fibroblasts.<br>Figure S1. Quality assessment of raw FASTQ files.<br>Figure S2. Workflow of the transcriptome analysis and the results of comparative analysis.<br>Figure S3. Gene expression profiling in pig ESC lines and preimplantation embryos.

本数据集包含以下文件：<br>补充文件1：研究方法描述<br>数据集2：标准化基因表达水平列表（每百万片段每千碱基外显子片段，FPKM；胚胎干细胞（Embryonic Stem Cells, ESCs）与胚胎）<br>数据集3：差异表达基因列表（倍数变化，Fold Change, FC；胚胎干细胞与胚胎）<br>表S1：RNA测序（RNA-seq）细胞样本汇总表<br>表S2：RNA测序（RNA-seq）比对统计结果汇总表<br>表S3：与成纤维细胞相比的差异表达基因（Differentially Expressed Genes, DEGs）数量<br>图S1：原始FASTQ文件质量评估<br>图S2：转录组分析流程及比较分析结果<br>图S3：猪胚胎干细胞系与植入前胚胎的基因表达谱