NCBI and iMicrobe accessions for transcriptomes of T. oceanica and T. weissflogii grown in varied Fe and light (GeTFeHvCOdia project)
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资源简介:
<p><strong>Marine MicroEukaryote Transcriptome Sequencing Project (MMETSP) Sample Links:</strong><br />
iMicrobe accession: <a href=\"http://data.imicrobe.us/project/view/104\" target=\"_blank\">http://data.imicrobe.us/project/view/104</a><br />
GenBank SRA accession: <a href=\"http://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA231566\" target=\"_blank\">http://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA231566</a></p>
<p><strong>Related Datasets:</strong></p>
<p><a href=\"http://data-mgr.bco-dmo.org/dataset/636567\" target=\"_blank\">Thalassiosira Fe and light limitation - culture conditions</a><br />
<a href=\"http://data-mgr.bco-dmo.org/dataset/636831\" target=\"_blank\">Thalassiosira Fe and light limitation - ENA accessions</a></p>
<p><strong>References:</strong></p>
<p><u>Media:</u><br />
Guillard RRL, Hargraves PE (1993). <em>Stichochrysis immobilis</em> is a diatom, not a chyrsophyte. <em>Phycologia</em> <strong>32:</strong> 234-236.</p>
<p><u>Culturing, RNA Extraction:</u><br />
Chappell, P.D.*, L.P. Whitney*, J.R. Wallace, A.I. Darer, S. Jean-Charles, and B.D. Jenkins. 2015. Genetic indicators of iron limitation in wild populations of <em>Thalassiosira oceanica</em> from the northeast Pacific Ocean – <em>ISME J. </em>9(3): 592-602. doi: 10.1038/ismej.2014.171 (* indicates co-first author)</p>
<p><u>Sequencing:</u><br />
Keeling, P.J. <em>et al.</em> (2014) The Marine Microbial Eukaryote Transcriptome Sequencing Project (MMETSP): illuminating the functional diversity of eukaryotic life in the oceans through transcriptome sequencing. <em>PLoS Biol, 12</em>(6), e1001889. doi: 10.1371/journal.pbio.1001889</p>
<p><strong>海洋微真核生物转录组测序项目(Marine MicroEukaryote Transcriptome Sequencing Project,MMETSP)样本链接:</strong><br />
iMicrobe 收录号:<a href="http://data.imicrobe.us/project/view/104" target="_blank">http://data.imicrobe.us/project/view/104</a><br />
GenBank 序列读取档案(Sequence Read Archive,SRA)收录号: <a href="http://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA231566" target="_blank">http://www.ncbi.nlm.nih.gov/bioproject/?term=PRJNA231566</a></p>
<p><strong>相关数据集:</strong></p>
<p><a href="http://data-mgr.bco-dmo.org/dataset/636567" target="_blank">海链藻属铁与光照限制——培养条件</a><br />
<a href="http://data-mgr.bco-dmo.org/dataset/636831" target="_blank">海链藻属铁与光照限制——欧洲核苷酸档案(European Nucleotide Archive,ENA)收录号</a></p>
<p><strong>参考文献:</strong></p>
<p><u>文献来源:</u><br />
Guillard RRL、Hargraves PE(1993)。<em>固定柱球藻(Stichochrysis immobilis)</em>实为硅藻而非金藻。<em>《藻类学(Phycologia)》</em><strong>32:</strong>234-236。</p>
<p><u>培养与RNA提取:</u><br />
Chappell P.D.*、Whitney L.P.*、Wallace J.R.、Darer A.I.、Jean-Charles S.、Jenkins B.D.,2015年。东北太平洋野生大洋海链藻(<em>Thalassiosira oceanica</em>)种群中铁限制的遗传标志物——<em>《ISME Journal》</em>9(3):592-602。DOI:10.1038/ismej.2014.171(* 标识共同第一作者)</p>
<p><u>测序相关:</u><br />
Keeling P.J. 等(2014)。《海洋微真核生物转录组测序项目(MMETSP):通过转录组测序解析海洋真核生物功能多样性》。<em>《PLOS生物学(PLoS Biol)》</em>12(6):e1001889。DOI:10.1371/journal.pbio.1001889</p>
创建时间:
2021-12-05



