multimolecule/rnacentral
收藏RNAcentral 数据集概述
基本信息
- 语言: RNA
- 标签: Biology, RNA
- 许可证: AGPL-3.0
- 数据集大小: 10M < n < 100M
数据来源
- multimolecule/5srrnadb
- multimolecule/crw
- multimolecule/dictybase
- multimolecule/ena
- multimolecule/ensembl
- multimolecule/ensembl_fungi
- multimolecule/ensembl_gencode
- multimolecule/ensembl_metazoa
- multimolecule/ensembl_plants
- multimolecule/ensembl_protists
- multimolecule/evlncrnas
- multimolecule/expression_atlas
- multimolecule/flybase
- multimolecule/genecards
- multimolecule/greengenes
- multimolecule/gtrnadb
- multimolecule/hgnc
- multimolecule/intact
- multimolecule/lncbase
- multimolecule/lncbook
- multimolecule/lncipedia
- multimolecule/lncrnadb
- multimolecule/malacards
- multimolecule/mgi
- multimolecule/mgnify
- multimolecule/mirbase
- multimolecule/mirgenedb
- multimolecule/modomics
- multimolecule/noncode
- multimolecule/pdbe
- multimolecule/pirbase
- multimolecule/plncdb
- multimolecule/pombase
- multimolecule/psicquic
- multimolecule/rdp
- multimolecule/refseq
- multimolecule/rfam
- multimolecule/rgd
- multimolecule/ribocentre
- multimolecule/ribovision
- multimolecule/sgd
- multimolecule/silva
- multimolecule/snodb
- multimolecule/snopy
- multimolecule/snorna_database
- multimolecule/srpdb
- multimolecule/tair
- multimolecule/tarbase
- multimolecule/tmrna_website
- multimolecule/wormbase
- multimolecule/zfin
- multimolecule/zwd
任务类别
- text-generation
- fill-mask
任务ID
- language-modeling
- masked-language-modeling
数据集名称
- RNAcentral
库名称
- multimolecule
数据集描述
- 主页: https://rnacentral.org
- 文档: https://multimolecule.danling.org/datasets/rnacentral
- 数据集链接: https://huggingface.co/datasets/multimolecule/rnacentral
- 联系人: Blake Sweeney
许可证
- 数据集许可证: AGPL-3.0
- 原始数据集许可证: CC0
引用
bibtex @article{rnacentral2021, author = {{RNAcentral Consortium}}, doi = {https://doi.org/10.1093/nar/gkaa921}, journal = {Nucleic Acids Research}, month = jan, number = {D1}, pages = {D212--D220}, publisher = {Oxford University Press (OUP)}, title = {{RNAcentral} 2021: secondary structure integration, improved sequence search and new member databases}, url = {https://academic.oup.com/nar/article/49/D1/D212/5940500}, volume = 49, year = 2021 }
@article{sweeney2020exploring, author = {Sweeney, Blake A. and Tagmazian, Arina A. and Ribas, Carlos E. and Finn, Robert D. and Bateman, Alex and Petrov, Anton I.}, doi = {https://doi.org/10.1002/cpbi.104}, eprint = {https://currentprotocols.onlinelibrary.wiley.com/doi/pdf/10.1002/cpbi.104}, journal = {Current Protocols in Bioinformatics}, keywords = {Galaxy, ncRNA, non-coding RNA, RNAcentral, RNA-seq}, number = {1}, pages = {e104}, title = {Exploring Non-Coding RNAs in RNAcentral}, url = {https://currentprotocols.onlinelibrary.wiley.com/doi/abs/10.1002/cpbi.104}, volume = 71, year = 2020 }
@article{rnacentral2019, author = {{The RNAcentral Consortium}}, doi = {https://doi.org/10.1093/nar/gky1034}, journal = {Nucleic Acids Research}, month = jan, number = {D1}, pages = {D221--D229}, publisher = {Oxford University Press (OUP)}, title = {{RNAcentral}: a hub of information for non-coding {RNA} sequences}, url = {https://academic.oup.com/nar/article/47/D1/D221/5160993}, volume = 47, year = 2019 }
@article{rnacentral2017, author = {{The RNAcentral Consortium} and Petrov, Anton I and Kay, Simon J E and Kalvari, Ioanna and Howe, Kevin L and Gray, Kristian A and Bruford, Elspeth A and Kersey, Paul J and Cochrane, Guy and Finn, Robert D and Bateman, Alex and Kozomara, Ana and Griffiths-Jones, Sam and Frankish, Adam and Zwieb, Christian W and Lau, Britney Y and Williams, Kelly P and Chan, Patricia Pand Lowe, Todd M and Cannone, Jamie J and Gutell, Robin and Machnicka, Magdalena A and Bujnicki, Janusz M and Yoshihama, Maki and Kenmochi, Naoya and Chai, Benli and Cole, James R and Szymanski, Maciej and Karlowski, Wojciech M and Wood, Valerie and Huala, Eva and Berardini, Tanya Z and Zhao, Yi and Chen, Runsheng and Zhu, Weimin and Paraskevopoulou, Maria D and Vlachos, Ioannis S and Hatzigeorgiou, Artemis G and Ma, Lina and Zhang, Zhang and Puetz, Joern and Stadler, Peter F and McDonald, Daniel and Basu, Siddhartha and Fey, Petra and Engel, Stacia R and Cherry, J Michael and Volders, Pieter-Jan and Mestdagh, Pieter and Wower, Jacek and Clark, Michael B and Quek, Xiu Cheng and Dinger, Marcel E}, doi = {https://doi.org/10.1093/nar/gkw1008}, journal = {Nucleic Acids Research}, month = jan, number = {D1}, pages = {D128--D134}, publisher = {Oxford University Press (OUP)}, title = {{RNAcentral}: a comprehensive database of non-coding {RNA} sequences}, url = {https://academic.oup.com/nar/article/45/D1/D128/2333921}, volume = 45, year = 2017 }
@article{rnacentral2015, author = {{RNAcentral Consortium} and Petrov, Anton I and Kay, Simon J E and Gibson, Richard and Kulesha, Eugene and Staines, Dan and Bruford, Elspeth A and Wright, Mathew W and Burge, Sarah and Finn, Robert D and Kersey, Paul J and Cochrane, Guy and Bateman, Alex and Griffiths-Jones, Sam and Harrow, Jennifer and Chan, Patricia P and Lowe, Todd M and Zwieb, Christian W and Wower, Jacek and Williams, Kelly P and Hudson, Corey M and Gutell, Robin and Clark, Michael B and Dinger, Marcel and Quek, Xiu Cheng and Bujnicki, Janusz M and Chua, Nam-Hai and Liu, Jun and Wang, Huan and Skogerb{o}, Geir and Zhao, Yi and Chen, Runsheng and Zhu, Weimin and Cole, James R and Chai, Benli and Huang, Hsien-Da and Huang, His-Yuan and Cherry, J Michael and Hatzigeorgiou, Artemis and Pruitt, Kim D}, doi = {https://doi.org/10.1093/nar/gku991}, journal = {Nucleic Acids Research}, month = jan, number = {Database issue}, pages = {D123--D129}, title = {{RNAcentral}: an international database of {ncRNA} sequences}, url = {https://academic.oup.com/nar/article/43/D1/D123/2439941}, volume = 43, year = 2015 }
@article{bateman2011rnacentral, author = {Bateman, Alex and Agrawal, Shipra and Birney, Ewan and Bruford, Elspeth A and Bujnicki, Janusz M and Cochrane, Guy and Cole, James R and Dinger, Marcel E and Enright, Anton J and Gardner, Paul P and Gautheret, Daniel and Griffiths-Jones, Sam and Harrow, Jen and Herrero, Javier and Holmes, Ian H and Huang, Hsien-Da and Kelly, Krystyna A and Kersey, Paul and Kozomara, Ana and Lowe, Todd M and Marz, Manja and Moxon, Simon andPruitt, Kim D and Samuelsson, Tore and Stadler, Peter F and Vilella, Albert J and Vogel, Jan-Hinnerk and Williams, Kelly P and Wright, Mathew W and Zwieb, Christian}, doi = {https://doi.org/10.1261/rna.2750811}, journal = {RNA}, month = nov, number = 11, pages = {1941--1946}, publisher = {Cold Spring Harbor Laboratory}, title = {{RNAcentral}: A vision for an international database of {RNA} sequences}, url = {https://rnajournal.cshlp.org/content/17/11/1941.long}, volume = 17, year = 2011 }
