Supplementary Figure S1 - Bact71 concat Gammaproteobacteria
收藏DataCite Commons2024-07-25 更新2024-08-19 收录
下载链接:
https://figshare.com/articles/dataset/Supplementary_Figure_S1_-_Bact71_concat_Gammaproteobacteria/26370142
下载链接
链接失效反馈官方服务:
资源简介:
Data files for the phylogeny in Supplementary Figure S1 of "Genetic potential for aerobic respiration and denitrification in globally distributed respiratory endosymbionts".<br><br>Files for a concatenated marker gene phylogeny of representatives of 305 gammaproteobacterial families. The genomes/mags included were obtained from the Genome Taxonomy Database (GTDB) and the genomic catalog of earth's microbiomes (GEM).<br><br>references:<br>GTDB:<br>https://academic.oup.com/nar/article/50/D1/D785/6370255 & https://gtdb.ecogenomic.org/<br>GEM:<br>https://www.nature.com/articles/s41587-020-0718-6 & https://genome.jgi.doe.gov/portal/GEMs/GEMs.home.html
《全球分布的呼吸内共生体的需氧呼吸与反硝化作用遗传潜力》一文补充图S1对应的系统发育分析数据文件。
包含305个γ-变形菌纲(Gammaproteobacteria)科的代表物种的串联标记基因系统发育分析所需的数据文件。本次分析所纳入的基因组/宏基因组组装基因组(Metagenome-Assembled Genome, MAG)均获取自基因组分类数据库(Genome Taxonomy Database, GTDB)与地球微生物组基因组目录(Genomic Catalog of Earth's Microbiomes, GEM)。
参考文献:
基因组分类数据库(GTDB):
https://academic.oup.com/nar/article/50/D1/D785/6370255 与 https://gtdb.ecogenomic.org/
地球微生物组基因组目录(GEM):
https://www.nature.com/articles/s41587-020-0718-6 与 https://genome.jgi.doe.gov/portal/GEMs/GEMs.home.html
提供机构:
figshare
创建时间:
2024-07-25



