Additional file 8: File S1. of ChiLin: a comprehensive ChIP-seq and DNase-seq quality control and analysis pipeline

H3K27me3 data QC report from ChiLin. The sequencing reads had been mapped to the mm10 genome build for BWA and Bowtie. File S2. Second H3K27me3 data QC report from ChiLin. The sequencing reads had been mapped to the hg38 genome build for BWA and Bowtie. File S3. H3K4me3 data QC report from ChiLin. The sequencing reads had been mapped to the mm10 genome build for BWA and Bowtie. File S4. Second H3K4me3 data QC report from ChiLin. The sequencing reads had been mapped to the mm10 genome build for BWA and Bowtie. File S5. H2A.Z data QC report from ChiLin. The sequencing reads had been mapped to the mm10 genome build for BWA and Bowtie. File S6. TRRAP data QC report from ChiLin. The sequencing reads had been mapped to the hg38 genome build for BWA and Bowtie. File S7. FOXA1 data QC report from ChiLin. The sequencing reads had been mapped to the hg38 genome build for BWA and Bowtie. File S8. STAT6 data QC report from ChiLin. The sequencing reads had been mapped to the mm10 genome build for BWA and Bowtie. File S9. AR data QC report from ChiLin. This report includes two immunoprecipitated and two input samples. The sequencing reads had been mapped to the hg38 genome build for BWA and Bowtie. File S10. RAD21 paired end data QC report from ChiLin. The sequencing reads had been mapped to the mm10 genome build for BWA and Bowtie. File S11. RAG2 data QC report from ChiLin. The sequencing reads had been mapped to the mm10 genome build for BWA and Bowtie. File S12. CHD7 data QC report from ChiLin. The sequencing reads had been mapped to the mm10 genome build for BWA and Bowtie. File S13. DNase-seq QC report from ChiLin. The sequencing reads had been mapped to the hg38 genome build for BWA and Bowtie. (GZ 9019Â kb)

本数据集包含ChiLin实验室产出的多项表观基因组测序数据质量控制（QC）报告，具体如下：
1. 文件S2：ChiLin的H3K27me3数据质量控制报告，测序读段经BWA与Bowtie比对至mm10基因组组装版本。
2. 文件S3：ChiLin的第二份H3K27me3数据质量控制报告，测序读段经BWA与Bowtie比对至hg38基因组组装版本。
3. 文件S4：ChiLin的H3K4me3数据质量控制报告，测序读段经BWA与Bowtie比对至mm10基因组组装版本。
4. 文件S5：ChiLin的第二份H3K4me3数据质量控制报告，测序读段经BWA与Bowtie比对至mm10基因组组装版本。
5. 文件S6：ChiLin的H2A.Z数据质量控制报告，测序读段经BWA与Bowtie比对至mm10基因组组装版本。
6. 文件S7：ChiLin的TRRAP数据质量控制报告，测序读段经BWA与Bowtie比对至hg38基因组组装版本。
7. 文件S8：ChiLin的FOXA1数据质量控制报告，测序读段经BWA与Bowtie比对至hg38基因组组装版本。
8. 文件S9：ChiLin的STAT6数据质量控制报告，测序读段经BWA与Bowtie比对至mm10基因组组装版本。
9. 文件S10：ChiLin的AR数据质量控制报告，该报告包含2份免疫沉淀样本与2份输入对照样本，测序读段经BWA与Bowtie比对至hg38基因组组装版本。
10. 文件S11：ChiLin的RAD21双端测序数据质量控制报告，测序读段经BWA与Bowtie比对至mm10基因组组装版本。
11. 文件S12：ChiLin的CHD7数据质量控制报告，测序读段经BWA与Bowtie比对至mm10基因组组装版本。
12. 文件S13：ChiLin的DNase-seq数据质量控制报告，测序读段经BWA与Bowtie比对至hg38基因组组装版本，文件压缩包大小约9019 KB。