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Additional file 1 of Comparison of ONT and CCS sequencing technologies on the polyploid genome of a medicinal plant showed that high error rate of ONT reads are not suitable for self-correction

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DataCite Commons2024-02-06 更新2024-08-18 收录
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https://springernature.figshare.com/articles/dataset/Additional_file_1_of_Comparison_of_ONT_and_CCS_sequencing_technologies_on_the_polyploid_genome_of_a_medicinal_plant_showed_that_high_error_rate_of_ONT_reads_are_not_suitable_for_self-correction/20462287/1
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Additional file 1: Table S1. Published allotetraploid genomes covered by short reads sequencing. Table S2. Blocks between nextdenovo assembly and chromosome-level hifiasm assembly. Tables S3. Discordance error in long reads mapped to different area of assemblies. Table S4. Postions with mismatch and gap of CCS-hifiasm assembly. Table S5. Discordance of CCS reads mapped to ONT-nextdenovo assembly. Table S6. Reads mapping and genome coverage

附加文件1:表S1。经短读长测序(short reads sequencing)覆盖的已发表异源四倍体基因组。表S2:nextdenovo组装与染色体级hifiasm组装之间的基因组区块。表S3:比对至不同组装区域的长读长测序读段的不一致性错误。表S4:CCS-hifiasm组装中存在错配与缺口的位点。表S5:比对至ONT-nextdenovo组装的CCS读段的不一致性情况。表S6:读段比对与基因组覆盖度
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figshare
创建时间:
2022-08-10
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