Additional file 1: of Comparative genomics of 84 Pectobacterium genomes reveals the variations related to a pathogenic lifestyle

Table S1. The biochemical characters and pathogenicity of 32 Chinese Pectobacterium carotovorum strains. Table S2. Selected phenotypic characteristics of Pectobacterium carotovorum subsp. brasiliense, P. carotovorum subsp. carotovorum and P. carotovorum subsp. odoriferum. Table S3. Eighty-four Pectobacterium genomes used in this study, with accession number, host origin and location information. Table S4. The general genomic features of the 84 Pectobacterium genomes. Table S5. The CRISPR-Cas systems identified in the 84 Pectobacterium genomes. Table S6. Presence of genes encoding general virulence factors in the 84 Pectobacterium genomes. Table S6â 1. The position of rmsB, the RNA fragment related to virulence in the 84 Pectobacterium genomes. Table S7. Gene clusters for TNSSs identified in the 84 Pectobacterium genomes. Table S8. Presence of the T6SSc gene cluster in the 203 Enterobacterales genomes. Table S9. Presence of the srl operon in the 203 Enterobacterales genomes. (XLSX 751 kb)

表S1 32株中国胡萝卜软腐果胶杆菌（Pectobacterium carotovorum）的生化特性与致病性。表S2 巴西亚种胡萝卜软腐果胶杆菌（Pectobacterium carotovorum subsp. brasiliense）、胡萝卜软腐果胶杆菌胡萝卜亚种（P. carotovorum subsp. carotovorum）以及胡萝卜软腐果胶杆菌气味亚种（P. carotovorum subsp. odoriferum）的选定表型特征。表S3 本研究采用的84株果胶杆菌属（Pectobacterium）基因组，涵盖登录号、宿主来源与采集地点信息。表S4 上述84株果胶杆菌属基因组的通用基因组特征。表S5 84株果胶杆菌属基因组中鉴定得到的CRISPR-Cas系统。表S6 84株果胶杆菌属基因组中编码一般毒力因子的基因存在情况。表S6-1 84株果胶杆菌属基因组中与毒力相关的RNA片段rmsB的位置。表S7 84株果胶杆菌属基因组中鉴定得到的TNSSs基因簇。表S8 203株肠杆菌目（Enterobacterales）基因组中T6SSc基因簇的存在情况。表S9 203株肠杆菌目基因组中srl操纵子的存在情况。（XLSX格式，文件大小751 KB）