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Analysis_Geno.lfmmData for: Reinforcement and cline evolution over half a century in the Upland chorus frog (Pseudacris feriarum)

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DataCite Commons2025-06-01 更新2025-09-08 收录
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https://figshare.com/articles/dataset/Analysis_Geno_lfmmData_for_Reinforcement_and_cline_evolution_over_half_a_century_in_the_Upland_chorus_frog_Pseudacris_feriarum_/29207561/1
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资源简介:
<strong>Analysis_Calls_Past.txt</strong> : Acoustic signaling data for male calls from past populations. Data includes the locality information, individual ID, and temperature-corrected pulse rate. <strong>Analysis_Calls_Present.txt</strong> : Acoustic signaling data for male calls from present populations. Data includes the locality information, individual ID, and temperature-corrected pulse rate. <strong>Analysis_Calls_Present_Other.txt</strong> : Acoustic signaling data for male calls from present populations. Data includes the locality information, individual ID, temperature-corrected pulse rate, pulse number, dominant frequency, call duration, and call rate. <strong>Analysis_Geno_Admix.txt</strong> : Admixture data estimated using DAPC in the present population used as input for the genetic cline analysis. Data includes the locality, distance from allopatry, number of samples, and admixture proportion. <strong>Analysis_Geno_SNPs.vcf</strong> : SNP data (acquired using RADseq) for the present population. <strong>Analysis_Geno.lfmm</strong> : SNP data formatted in the .lfmm format for the present population. <strong>Analysis_Locs_Past.txt</strong> : Locality information for the past populations cline analysis, including distance from allopatry. <strong>Analysis_Locs_Present.txt</strong> : Locality information for the present populations cline analysis, including distance from allopatry. <strong>Analysis_Present_Coords.txt</strong> : Locality information for the present populations, including coordinates.

<strong>Analysis_Calls_Past.txt</strong> : 过去种群雄性鸣声的声学信号数据。数据集包含采样地点信息、个体编号以及经温度校正的脉冲率。 <strong>Analysis_Calls_Present.txt</strong> : 当前种群雄性鸣声的声学信号数据。数据集包含采样地点信息、个体编号以及经温度校正的脉冲率。 <strong>Analysis_Calls_Present_Other.txt</strong> : 当前种群雄性鸣声的声学信号数据。数据集包含采样地点信息、个体编号、经温度校正的脉冲率、脉冲数、主频、鸣声时长以及鸣唱速率。 <strong>Analysis_Geno_Admix.txt</strong> : 用于遗传梯度分析输入的当前种群的经判别分析主成分(DAPC, Discriminant Analysis of Principal Components)估计得到的遗传混合数据。数据集包含采样地点、与异域种群的距离、样本数量以及混合比例。 <strong>Analysis_Geno_SNPs.vcf</strong> : 当前种群的单核苷酸多态性(SNP, Single Nucleotide Polymorphism)数据,通过限制性位点关联DNA测序(RADseq, Restriction-site Associated DNA sequencing)获取。 <strong>Analysis_Geno.lfmm</strong> : 当前种群的单核苷酸多态性数据,格式为.lfmm格式。 <strong>Analysis_Locs_Past.txt</strong> : 用于遗传梯度分析的过去种群的采样地点信息,包含与异域种群的距离。 <strong>Analysis_Locs_Present.txt</strong> : 用于遗传梯度分析的当前种群的采样地点信息,包含与异域种群的距离。 <strong>Analysis_Present_Coords.txt</strong> : 当前种群的采样地点信息,包含地理坐标。
提供机构:
figshare
创建时间:
2025-06-01
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