neuralbioinfo/PhaStyle-EXTREMOPHILE
收藏Hugging Face2025-01-09 更新2025-04-12 收录
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https://hf-mirror.com/datasets/neuralbioinfo/PhaStyle-EXTREMOPHILE
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资源简介：
PhaStyle-EXTREMOPHILE数据集是一个用于评估ProkBERT PhaStyle模型预测噬菌体生活方式的测试数据集。它包含了来自深海、酸性环境和富含砷的环境中的噬菌体序列，这些序列被分割为512bp和1022bp的片段以模拟片段化的宏基因组组装。该数据集主要用于将噬菌体分类为毒性或温和性，并使用基因语言模型方法进行评估。
The PhaStyle-EXTREMOPHILE dataset is a test dataset used for evaluating the ProkBERT PhaStyle model for phage lifestyle prediction. It contains phage sequences isolated from extreme environments such as deep-sea, acidic, and arsenic-rich habitats, segmented into 512bp and 1022bp fragments to simulate fragmented metagenomic assemblies. The dataset is primarily used for classifying phages as virulent or temperate and has been assessed using genomic language modeling approaches like ProkBERT PhaStyle.
提供机构：
neuralbioinfo
