Permutation group analysis of gene expression ranking dynamics enables improved characterization of global rearrangement patterns for treatment response

Gene expression data for 39 genes from the most effective therapeutic module (METM), measured in 37 patients at three time points (Day 0, 14, 30). Patients are grouped by treatment response: δAF≥40 (n=7), δAF=20 (n=6), δAF=10 (n=6), and δAF<0 (n=18). This dataset was used for permutation group analysis of gene expression ranking dynamics to characterize global rearrangement patterns of treatment response.