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CPT-1 whole-proteome feature matrices (no-EVE set)

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https://zenodo.org/record/8137107
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Cross-protein transfer learning for variant effect prediction This repository contains the feature matrices for CPT-1 to make variant effect prediction on 15,557 human proteins NOT in the EVE set (Frazer et al., 2021), initially released with the manuscript "Cross-protein transfer learning substantially improves zero-shot prediction of disease variant effects".   Citation Jagota, M.*, Ye, C.*, Albors, C., Rastogi, R., Koehl, A., Ioannidis, N., and Song, Y.S.† "Cross-protein transfer learning substantially improves zero-shot prediction of disease variant effects", bioRxiv (2022) *These authors contributed equally to this work. †To whom correspondence should be addressed: yss@berkeley.edu DOI: https://doi.org/10.1101/2022.11.15.516532
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2023-07-16
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