Additional file 1 of Genome-wide transcriptome analysis of the early developmental stages of Echinococcus granulosus protoscoleces reveals extensive alternative splicing events in the spliceosome pathway
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Additional file 1: Table S1. List of primers used for reverse transcription PCR validation to amplify both isoforms of each splice variant in a single reaction. Primers flanking predicted splicing events were designed using PrimerSeq software. Table S2. Proportions of the three types of sequence reads mapping to the genomes of early developmental stages of Echinococcus granulosus protoscoleces. Table S3. Identified genes with differential alternative splicing events in the early developmental stages of Echinococcus granulosus protoscoleces. Table S4. List of genes with differential alternative splicing events in the early developmental stages of Echinococcus granulosus protoscoleces relating to the catalytic activity and ligase activity in GO analysis of RNA-seq data. Table S5. BRITE hierarchy of Echinococcus granulosus gene IDs with differential alternative splicing events in the early developmental stages of E. granulosus protoscoleces.
提供机构:
Harandi, Majid Fasihi; Mohammadi, Mohammad Ali; Mansouri, Mehdi; McManus, Donald P.
创建时间:
2021-11-13



